Algorithms and data structures for the analysis of sequences with the focus on biological data. [BSD/3-clause]

SeqAn alternatives and similar libraries

Based on the "Biology" category

• Vcflib

  4.9 6.1 L1 SeqAn VS Vcflib

  A C++ library for parsing and manipulating VCF files. [MIT]

• Wham

  2.5 0.0 SeqAn VS Wham

  Structural variants (SVs) in Genomes by directly applying association tests to BAM files. [MIT]

• libsequence

  2.2 2.6 L1 SeqAn VS libsequence

  A C++ library for representing and analyzing population genetics data. [GPL]

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• SeqAn
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